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Analytical and Computational Methods

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Model‐based design of experiments for cellular processes

Advanced Review
Ankush Chakrabarty, Gregery T. Buzzard, Ann E. Rundell
Published Online: Jan 04 2013
DOI:10.1002/wsbm.1204

Abstract Full article on Wiley Online Library:   HTML | PDF
Accelerating cancer systems biology research through Semantic Web technology

Overview
Zhihui Wang, Jonathan Sagotsky, Thomas Taylor, Patrick Shironoshita, Thomas S. Deisboeck
Published Online: Nov 27 2012
DOI:10.1002/wsbm.1200

Abstract Full article on Wiley Online Library:   HTML | PDF
Promise of personalized omics to precision medicine

Advanced Review
Rui Chen, Michael Snyder
Published Online: Nov 26 2012
DOI:10.1002/wsbm.1198

Abstract Full article on Wiley Online Library:   HTML | PDF
From base pair to bedside: molecular simulation and the translation of genomics to personalized medicine

Advanced Review
David W. Wright, Shunzhou Wan, Nour Shublaq, Stefan J. Zasada, Peter V. Coveney
Published Online: Aug 15 2012
DOI:10.1002/wsbm.1186

Abstract Full article on Wiley Online Library:   HTML | PDF
Mitochondrial network energetics in the heart

Advanced Review
Miguel A. Aon, Sonia Cortassa
Published Online: Aug 15 2012
DOI:10.1002/wsbm.1188

Abstract Full article on Wiley Online Library:   HTML | PDF
Complexity and the reductionism–holism debate in systems biology

Overview
Fulvio Mazzocchi
Published Online: Jul 03 2012
DOI:10.1002/wsbm.1181

Abstract Full article on Wiley Online Library:   HTML | PDF
Systems biology approaches to toll‐like receptor signaling

Focus Article
Alexis Vandenbon, Shunsuke Teraguchi, Shizuo Akira, Kiyoshi Takeda, Daron M. Standley
Published Online: Jun 19 2012
DOI:10.1002/wsbm.1178

Abstract Full article on Wiley Online Library:   HTML | PDF
Recent approaches to the prioritization of candidate disease genes

Advanced Review
Nadezhda T. Doncheva, Tim Kacprowski, Mario Albrecht
Published Online: Jun 11 2012
DOI:10.1002/wsbm.1177

Abstract Full article on Wiley Online Library:   HTML | PDF
Isotope labeling experiments in metabolomics and fluxomics

Advanced Review
Sebastian Klein, Elmar Heinzle
Published Online: Mar 23 2012
DOI:10.1002/wsbm.1167

Abstract Full article on Wiley Online Library:   HTML | PDF
Linking genome to epigenome

Focus Article
Guo‐Cheng Yuan
Published Online: Feb 17 2012
DOI:10.1002/wsbm.1165

Abstract Full article on Wiley Online Library:   HTML | PDF
Reverse‐engineering human regulatory networks

Advanced Review
Celine Lefebvre, Gabrielle Rieckhof, Andrea Califano
Published Online: Jan 13 2012
DOI:10.1002/wsbm.1159

Abstract Full article on Wiley Online Library:   HTML | PDF
Mass spectrometry‐based proteomics: qualitative identification to activity‐based protein profiling

Advanced Review
Job D. Cardoza, Jignesh R. Parikh, Scott B. Ficarro, Jarrod A. Marto
Published Online: Jan 09 2012
DOI:10.1002/wsbm.166

Abstract Full article on Wiley Online Library:   HTML | PDF
Virtual Cell: computational tools for modeling in cell biology

Advanced Review
Diana C. Resasco, Fei Gao, Frank Morgan, Igor L. Novak, James C. Schaff, Boris M. Slepchenko
Published Online: Dec 02 2011
DOI:10.1002/wsbm.165

Abstract Full article on Wiley Online Library:   HTML | PDF
Integrative physical oncology

Opinion
Haralampos Hatzikirou, Arnaud Chauviere, Amy L. Bauer, André Leier, Michael T. Lewis, Paul Macklin, Tatiana T. Marquez‐Lago, Elaine L. Bearer, Vittorio Cristini
Published Online: Aug 18 2011
DOI:10.1002/wsbm.158

Abstract Full article on Wiley Online Library:   HTML | PDF
Mathematical models in biology: from molecules to life

Advanced Review
Yiannis N. Kaznessis
Published Online: Feb 18 2011
DOI:10.1002/wsbm.142

Abstract Full article on Wiley Online Library:   HTML | PDF
Drug repurposing and adverse event prediction using high‐throughput literature analysis

Advanced Review
Spyros N. Deftereos, Christos Andronis, Ellen J. Friedla, Aris Persidis, Andreas Persidis
Published Online: Feb 16 2011
DOI:10.1002/wsbm.147

Abstract Full article on Wiley Online Library:   HTML | PDF
Signaling pathways that control cell migration: models and analysis

Focus Article
Erik S. Welf, Jason M. Haugh
Published Online: Feb 08 2011
DOI:10.1002/wsbm.110

Abstract Full article on Wiley Online Library:   HTML | PDF
Influenza A virus infection kinetics: quantitative data and models

Advanced Review
Amber M. Smith, Alan S. Perelson
Published Online: Dec 31 2010
DOI:10.1002/wsbm.129

Abstract Full article on Wiley Online Library:   HTML | PDF
Synthetic biology: putting synthesis into biology

Advanced Review
Jing Liang, Yunzi Luo, Huimin Zhao
Published Online: Dec 16 2010
DOI:10.1002/wsbm.104

Abstract Full article on Wiley Online Library:   HTML | PDF
Advances in analysis of transcriptional regulatory networks

Advanced Review
Peter J. Park, Tae‐Min Kim
Published Online: Dec 16 2010
DOI:10.1002/wsbm.105

Abstract Full article on Wiley Online Library:   HTML | PDF
An interdisciplinary systems approach to study sperm physiology and evolution

Advanced Review
Linda Z. Shi, Jaclyn Nascimento, Elliot Botvinick, Barbara Durrant, Michael W. Berns
Published Online: Dec 16 2010
DOI:10.1002/wsbm.106

Abstract Full article on Wiley Online Library:   HTML | PDF
Hybrid models of tumor growth

Focus Article
Katarzyna A. Rejniak, Alexander R. A. Anderson
Published Online: Dec 16 2010
DOI:10.1002/wsbm.102

Abstract Full article on Wiley Online Library:   HTML | PDF
An energy systems approach to Parkinson's disease

Opinion
Mathieu Cloutier, Peter Wellstead
Published Online: Dec 16 2010
DOI:10.1002/wsbm.107

Abstract Full article on Wiley Online Library:   HTML | PDF
Role of systems pharmacology in understanding drug adverse events

Opinion
Seth I. Berger, Ravi Iyengar
Published Online: Aug 27 2010
DOI:10.1002/wsbm.114

Abstract Full article on Wiley Online Library:   HTML | PDF
In silico models of bone remodeling from macro to nano—from organ to cell

Focus Article
Duncan Webster, Ralph Müller
Published Online: Aug 25 2010
DOI:10.1002/wsbm.115

Abstract Full article on Wiley Online Library:   HTML | PDF
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