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RNA Methods

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Rules and tools to predict the splicing effects of exonic and intronic mutations

Advanced Review
Kinji Ohno, Jun‐ichi Takeda, Akio Masuda
Published Online: Sep 26 2017
DOI:10.1002/wrna.1451

Abstract Full article on Wiley Online Library:   HTML | PDF
Advances and challenges in the detection of transcriptome‐wide protein– RNA interactions

Opinion
Emily C. Wheeler, Eric L. Van Nostrand, Gene W. Yeo
Published Online: Aug 29 2017
DOI:10.1002/wrna.1436

Abstract Full article on Wiley Online Library:   HTML | PDF
Single cell transcriptomics of noncoding RNAs and their cell‐specificity

Opinion
Katerina A.B. Gawronski, Junhyong Kim
Published Online: Aug 01 2017
DOI:10.1002/wrna.1433

Abstract Full article on Wiley Online Library:   HTML | PDF
An emerging model organism Caenorhabditis elegans for alternative pre‐ mRNA processing in vivo

Advanced Review
Shotaro Wani, Hidehito Kuroyanagi
Published Online: Jul 13 2017
DOI:10.1002/wrna.1428

Abstract Full article on Wiley Online Library:   HTML | PDF
Bioinformatic tools for analysis of CLIP ribonucleoprotein data

Focus Article
Supriyo De, Myriam Gorospe
Published Online: Dec 23 2016
DOI:10.1002/wrna.1404

Abstract Full article on Wiley Online Library:   HTML | PDF
Advances in RNA molecular dynamics: a simulator's guide to RNA force fields

Advanced Review
Sweta Vangaveti, Srivathsan V. Ranganathan, Alan A. Chen
Published Online: Oct 04 2016
DOI:10.1002/wrna.1396

Abstract Full article on Wiley Online Library:   HTML | PDF
Fluorophore‐binding RNA aptamers and their applications

Focus Article
Elena V. Dolgosheina, Peter J. Unrau
Published Online: Aug 08 2016
DOI:10.1002/wrna.1383

Abstract Full article on Wiley Online Library:   HTML | PDF
Evolutionary clues in lncRNAs

Advanced Review
Anne Nitsche, Peter F. Stadler
Published Online: Jul 19 2016
DOI:10.1002/wrna.1376

Abstract Full article on Wiley Online Library:   HTML | PDF
Going global: the new era of mapping modifications in RNA

Advanced Review
Patrick A. Limbach, Mellie June Paulines
Published Online: Jun 01 2016
DOI:10.1002/wrna.1367

Abstract Full article on Wiley Online Library:   HTML | PDF
Lights, camera, action! Capturing the spliceosome and pre‐ mRNA splicing with single‐molecule fluorescence microscopy

Advanced Review
Alexander C. DeHaven, Ian S. Norden, Aaron A. Hoskins
Published Online: May 20 2016
DOI:10.1002/wrna.1358

Abstract Full article on Wiley Online Library:   HTML | PDF
RNA ‐Seq methods for transcriptome analysis

Advanced Review
Radmila Hrdlickova, Masoud Toloue, Bin Tian
Published Online: May 19 2016
DOI:10.1002/wrna.1364

Abstract Full article on Wiley Online Library:   HTML | PDF
Virus‐derived small RNAs: molecular footprints of host–pathogen interactions

Advanced Review
Eric Roberto Guimarães Rocha Aguiar, Roenick Proveti Olmo, João Trindade Marques
Published Online: May 12 2016
DOI:10.1002/wrna.1361

Abstract Full article on Wiley Online Library:   HTML | PDF
Bioengineering of noncoding RNAs for research agents and therapeutics

Advanced Review
Pui Yan Ho, Ai‐Ming Yu
Published Online: Jan 13 2016
DOI:10.1002/wrna.1324

Abstract Full article on Wiley Online Library:   HTML | PDF
Computational challenges, tools, and resources for analyzing co‐ and post‐transcriptional events in high throughput

Advanced Review
Emad Bahrami‐Samani, Dat T. Vo, Patricia Rosa de Araujo, Christine Vogel, Andrew D. Smith, Luiz O. F. Penalva, Philip J. Uren
Published Online: Dec 16 2014
DOI:10.1002/wrna.1274

Abstract Full article on Wiley Online Library:   HTML | PDF
RNA structural analysis by evolving SHAPE chemistry

Advanced Review
Robert C. Spitale, Ryan A. Flynn, Eduardo A. Torre, Eric T. Kool, Howard Y. Chang
Published Online: Aug 15 2014
DOI:10.1002/wrna.1253

Abstract Full article on Wiley Online Library:   HTML | PDF
miRNA  sponges: soaking up  miRNAs for regulation of gene expression

Advanced Review
Rasmus O. Bak, Jacob Giehm Mikkelsen
Published Online: Dec 23 2013
DOI:10.1002/wrna.1213

Abstract Full article on Wiley Online Library:   HTML | PDF
Means to an end: mechanisms of alternative polyadenylation of messenger RNA precursors

Advanced Review
Andreas R. Gruber, Georges Martin, Walter Keller, Mihaela Zavolan
Published Online: Nov 14 2013
DOI:10.1002/wrna.1206

Abstract Full article on Wiley Online Library:   HTML | PDF
Finding the target sites of RNA ‐binding proteins

Advanced Review
Xiao Li, Hilal Kazan, Howard D. Lipshitz, Quaid D. Morris
Published Online: Nov 11 2013
DOI:10.1002/wrna.1201

Abstract Full article on Wiley Online Library:   HTML | PDF
Prospects for analyzing ancient RNA in preserved materials

Advanced Review
Paul L. Guy
Published Online: Nov 07 2013
DOI:10.1002/wrna.1199

Abstract Full article on Wiley Online Library:   HTML | PDF
Cytoplasmic intron retention, function, splicing, and the sentinel RNA hypothesis

Advanced Review
Peter T. Buckley, Mugdha Khaladkar, Junhyong Kim, James Eberwine
Published Online: Nov 04 2013
DOI:10.1002/wrna.1203

Abstract Full article on Wiley Online Library:   HTML | PDF
Messenger RNA ‐based vaccines: progress, challenges, applications

Focus Article
Thomas Kramps, Jochen Probst
Published Online: Jul 25 2013
DOI:10.1002/wrna.1189

Abstract Full article on Wiley Online Library:   HTML | PDF
RNA Tectonics ( tectoRNA ) for RNA nanostructure design and its application in synthetic biology

Advanced Review
Junya Ishikawa, Hiroyuki Furuta, Yoshiya Ikawa
Published Online: Jul 08 2013
DOI:10.1002/wrna.1185

Abstract Full article on Wiley Online Library:   HTML | PDF
Ribosome profiling: a Hi‐Def monitor for protein synthesis at the genome‐wide scale

Advanced Review
Audrey M. Michel, Pavel V. Baranov
Published Online: May 20 2013
DOI:10.1002/wrna.1172

Abstract Full article on Wiley Online Library:   HTML | PDF
Translation regulation gets its ‘omics’ moment

Advanced Review
Scott Kuersten, Agnes Radek, Christine Vogel, Luiz O. F. Penalva
Published Online: May 15 2013
DOI:10.1002/wrna.1173

Abstract Full article on Wiley Online Library:   HTML | PDF
Computational biology of RNA interactions

Advanced Review
Christoph Dieterich, Peter F. Stadler
Published Online: Nov 08 2012
DOI:10.1002/wrna.1147

Abstract Full article on Wiley Online Library:   HTML | PDF
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