Afromowitz,, M. A., Callis,, J. B., Heimbach,, D. M., DeSoto,, L. A., & Norton,, M. K. (1988). Multispectral imaging of burn wounds: A new clinical instrument for evaluating burn depth. IEEE Transactions on Biomedical Engineering, 35(10), 842–850.
Akbari,, H., Halig,, L., Schuster,, D. M., Fei,, B., Osunkoya,, A., Master,, V., … Chen,, G. (2012). Hyperspectral imaging and quantitative analysis for prostate cancer detection. Journal of Biomedical Optics, 17(7), 076005.
Akbari,, H., Kosugi,, Y., Kojima,, K., & Tanaka,, N. (2008a). Hyperspectral imaging and diagnosis of intestinal ischemia. Paper presented at the 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2008. EMBS 2008.
Akbari,, H., Kosugi,, Y., Kojima,, K., & Tanaka,, N. (2008b). Wavelet‐based compression and segmentation of hyperspectral images in surgery. Paper presented at the International Workshop on Medical Imaging and Virtual Reality.
Akbari,, H., Kosugi,, Y., Kojima,, K., & Tanaka,, N. (2010). Detection and analysis of the intestinal ischemia using visible and invisible hyperspectral imaging. IEEE Transactions on Biomedical Engineering, 57(8), 2011–2017.
Akbari,, H., Uto,, K., Kosugi,, Y., Kojima,, K., & Tanaka,, N. (2011). Cancer detection using infrared hyperspectral imaging. Cancer Science, 102(4), 852–857.
Alafeef,, M., Dighe,, K., & Pan,, D. (2019). Label‐free pathogen detection based on yttrium‐doped carbon nanoparticles up to single‐cell resolution. ACS Applied Materials %26 Interfaces, 11(46), 42943–42955.
Amenabar,, I., Poly,, S., Goikoetxea,, M., Nuansing,, W., Lasch,, P., & Hillenbrand,, R. (2017). Hyperspectral infrared nanoimaging of organic samples based on Fourier transform infrared nanospectroscopy. Nature Communications, 8(1), 1–10.
Amenabar,, I., Poly,, S., Nuansing,, W., Hubrich,, E. H., Govyadinov,, A. A., Huth,, F., … Heberle,, J. (2013). Structural analysis and mapping of individual protein complexes by infrared nanospectroscopy. Nature Communications, 4(1), 1–9.
Anker,, J. N., Hall,, W. P., Lyandres,, O., Shah,, N. C., Zhao,, J., & Van Duyne,, R. P. (2008). Nature Materials, 7, 442–453.
Arrigoni,, S., Turra,, G., & Signoroni,, A. (2017). Hyperspectral image analysis for rapid and accurate discrimination of bacterial infections: A benchmark study. Computers in Biology and Medicine, 88, 60–71.
Ashaduzzaman,, M., Deshpande,, S. R., Murugan,, N. A., Mishra,, Y. K., Turner,, A. P., & Tiwari,, A. (2017). On/off‐switchable LSPR nano‐immunoassay for troponin‐T. Scientific Reports, 7, 44027.
Baker,, M. J., Trevisan,, J., Bassan,, P., Bhargava,, R., Butler,, H. J., Dorling,, K. M., … Heys,, K. A. (2014). Using Fourier transform IR spectroscopy to analyze biological materials. Nature Protocols, 9(8), 1771–1791.
Bansal,, V., Jani,, H., Du Plessis,, J., Coloe,, P. J., & Bhargava,, S. K. (2008). Galvanic replacement reaction on metal films: A one‐step approach to create nanoporous surfaces for catalysis. Advanced Materials, 20(4), 717–723.
Bechtel,, H. A., Muller,, E. A., Olmon,, R. L., Martin,, M. C., & Raschke,, M. B. (2014). Ultrabroadband infrared nanospectroscopic imaging. Proceedings of the National Academy of Sciences of the United States of America, 111(20), 7191–7196.
Beier,, B. D., Quivey,, R. G., & Berger,, A. J. (2010). Identification of different bacterial species in biofilms using confocal Raman microscopy. Journal of Biomedical Optics, 15(6), 066001.
Benavides,, J. M., Chang,, S., Park,, S. Y., Richards‐Kortum,, R., Mackinnon,, N., MacAulay,, C., … Follen,, M. (2003). Multispectral digital colposcopy for in vivo detection of cervical cancer. Optics Express, 11(10), 1223–1236.
Bhagawati,, M., You,, C., & Piehler,, J. (2013). Quantitative real‐time imaging of protein–protein interactions by LSPR detection with micropatterned gold nanoparticles. Analytical Chemistry, 85(20), 9564–9571.
Bohren,, C., & Huffman,, D. (2008). Absorption and scattering of light by small particles. Mörl enbach, Germany: John Wiley & Sons.
Boldrini,, B., Kessler,, W., Rebner,, K., & Kessler,, R. W. (2012). Hyperspectral imaging: A review of best practice, performance and pitfalls for in‐line and on‐line applications. Journal of Near Infrared Spectroscopy, 20(5), 483–508.
Brehm,, M., Taubner,, T., Hillenbrand,, R., & Keilmann,, F. (2006). Infrared spectroscopic mapping of single nanoparticles and viruses at nanoscale resolution. Nano Letters, 6(7), 1307–1310.
Bu,, T., Zako,, T., Fujita,, M., & Maeda,, M. (2013). Detection of DNA induced gold nanoparticle aggregation with dark field imaging. Chemical Communications, 49(68), 7531–7533.
Butler,, H. J., Ashton,, L., Bird,, B., Cinque,, G., Curtis,, K., Dorney,, J., … Martin‐Hirsch,, P. L. (2016). Using Raman spectroscopy to characterize biological materials. Nature Protocols, 11(4), 664–687.
Cha,, J., Broch,, A., Mudge,, S., Kim,, K., Namgoong,, J.‐M., Oh,, E., & Kim,, P. (2018). Real‐time, label‐free, intraoperative visualization of peripheral nerves and micro‐vasculatures using multimodal optical imaging techniques. Biomedical Optics Express, 9(3), 1097–1110.
Chaichi,, A., Prasad,, A., & Gartia,, M. R. (2018). Raman spectroscopy and microscopy applications in cardiovascular diseases: From molecules to organs. Biosensors, 8(4), 107.
Chaudhari,, K., & Pradeep,, T. (2014). Spatiotemporal mapping of three dimensional rotational dynamics of single ultrasmall gold nanorods. Scientific Reports, 4, 5948.
Chen,, Z., Li,, J., Chen,, X., Cao,, J., Zhang,, J., Min,, Q., & Zhu,, J.‐J. (2015). Single gold@ silver nanoprobes for real‐time tracing the entire autophagy process at single‐cell level. Journal of the American Chemical Society, 137(5), 1903–1908.
Chernenko,, T., Matthäus,, C., Milane,, L., Quintero,, L., Amiji,, M., & Diem,, M. (2009). Label‐free Raman spectral imaging of intracellular delivery and degradation of polymeric nanoparticle systems. ACS Nano, 3(11), 3552–3559.
Chin,, J. A., Wang,, E. C., & Kibbe,, M. R. (2011). Evaluation of hyperspectral technology for assessing the presence and severity of peripheral artery disease. Journal of Vascular Surgery, 54(6), 1679–1688.
Choi,, J., Choo,, J., Chung,, H., Gweon,, D. G., Park,, J., Kim,, H. J., … Oh,, C. H. (2005). Direct observation of spectral differences between normal and basal cell carcinoma (BCC) tissues using confocal Raman microscopy. Biopolymers: Original Research on Biomolecules, 77(5), 264–272.
Clemens,, G., Hands,, J. R., Dorling,, K. M., & Baker,, M. J. (2014). Vibrational spectroscopic methods for cytology and cellular research. Analyst, 139(18), 4411–4444.
Conti,, M., Scanferlato,, R., Louka,, M., Sansone,, A., Marzetti,, C., & Ferreri,, C. (2016). Building up spectral libraries for mapping erythrocytes by hyperspectral dark field microscopy. Biomedical Spectroscopy and Imaging, 5(2), 175–184.
Dahlin,, A. B., Tegenfeldt,, J. O., & Höök,, F. (2006). Improving the instrumental resolution of sensors based on localized surface plasmon resonance. Analytical Chemistry, 78(13), 4416–4423.
De La Rica,, R., & Stevens,, M. M. (2012). Plasmonic ELISA for the ultrasensitive detection of disease biomarkers with the naked eye. Nature Nanotechnology, 7(12), 821–824.
Doornbos,, R., Lang,, R., Aalders,, M., Cross,, F., & Sterenborg,, H. (1999). The determination of in vivo human tissue optical properties and absolute chromophore concentrations using spatially resolved steady‐state diffuse reflectance spectroscopy. Physics in Medicine %26 Biology, 44(4), 967–981.
Du,, H., Fuh,, R. C. A., Li,, J., Corkan,, L. A., & Lindsey,, J. S. (1998). PhotochemCAD: A computer‐aided design and research tool in photochemistry. Photochemistry and Photobiology, 68(2), 141–142.
Duan,, X., Chan,, C., Guo,, N., Han,, W., Weichselbaum,, R. R., & Lin,, W. (2016). Photodynamic therapy mediated by nontoxic core–shell nanoparticles synergizes with immune checkpoint blockade to elicit antitumor immunity and antimetastatic effect on breast cancer. Journal of the American Chemical Society, 138(51), 16686–16695.
El‐Khoury,, P. Z., Joly,, A. G., & Hess,, W. P. (2016). Hyperspectral dark field optical microscopy of single silver nanospheres. The Journal of Physical Chemistry C, 120(13), 7295–7298.
Faridli,, Z., Mahani,, M., Torkzadeh‐Mahani,, M., & Fasihi,, J. (2016). Development of a localized surface plasmon resonance‐based gold nanobiosensor for the determination of prolactin hormone in human serum. Analytical Biochemistry, 495, 32–36.
Fei,, B., Lu,, G., Wang,, X., Zhang,, H., Little,, J. V., Patel,, M. R., … Chen,, A. Y. (2017). Label‐free reflectance hyperspectral imaging for tumor margin assessment: A pilot study on surgical specimens of cancer patients. Journal of Biomedical Optics, 22(8), 086009.
Feng,, Y.‐Z., & Sun,, D.‐W. (2013). Determination of total viable count (TVC) in chicken breast fillets by near‐infrared hyperspectral imaging and spectroscopic transforms. Talanta, 105, 244–249.
Freeman,, J., Shi,, Y., Panasyuk,, S., & Rogers,, A. (2004). Medical hyperspectral imaging (MHSI) of 1, 2dimethylbenz (a) anthracene (DMBA)‐induced breast tumors in rats. Paper presented at the Breast Cancer Research and Treatment.
Fu,, D., Yang,, W., & Xie,, X. S. (2016). Label‐free imaging of neurotransmitter acetylcholine at neuromuscular junctions with stimulated Raman scattering. Journal of the American Chemical Society, 139(2), 583–586.
González,, E., Arbiol,, J., & Puntes,, V. F. (2011). Carving at the nanoscale: Sequential galvanic exchange and Kirkendall growth at room temperature. Science, 334(6061), 1377–1380.
Gosnell,, M. E., Anwer,, A. G., Mahbub,, S. B., Perinchery,, S. M., Inglis,, D. W., Adhikary,, P. P., … Pollock,, C. A. (2016). Quantitative non‐invasive cell characterisation and discrimination based on multispectral autofluorescence features. Scientific Reports, 6, 23453.
Gowen,, A. A., Feng,, Y., Gaston,, E., & Valdramidis,, V. (2015). Recent applications of hyperspectral imaging in microbiology. Talanta, 137, 43–54.
Greenman,, R. L., Panasyuk,, S., Wang,, X., Lyons,, T. E., Dinh,, T., Longoria,, L., … Veves,, A. (2005). Early changes in the skin microcirculation and muscle metabolism of the diabetic foot. The Lancet, 366(9498), 1711–1717.
Guo,, L., Ferhan,, A. R., Chen,, H., Li,, C., Chen,, G., Hong,, S., & Kim,, D. H. (2013). Distance‐mediated plasmonic dimers for reusable colorimetric switches: A measurable peak shift of more than 60 nm. Small, 9(2), 234–240.
Gupta,, N. (2011). Development of staring hyperspectral imagers. Paper presented at the 2011 IEEE Applied Imagery Pattern Recognition Workshop (AIPR).
Haddada,, M. B., Hu,, D., Salmain,, M., Zhang,, L., Peng,, C., Wang,, Y., … Boujday,, S. (2017). Gold nanoparticle‐based localized surface plasmon immunosensor for staphylococcal enterotoxin A (SEA) detection. Analytical and Bioanalytical Chemistry, 409(26), 6227–6234.
Haes,, A. J., Chang,, L., Klein,, W. L., & Van Duyne,, R. P. (2005). Detection of a biomarker for Alzheimer`s disease from synthetic and clinical samples using a nanoscale optical biosensor. Journal of the American Chemical Society, 127(7), 2264–2271.
Haes,, A. J., & Van Duyne,, R. P. (2004). A unified view of propagating and localized surface plasmon resonance biosensors. Analytical and Bioanalytical Chemistry, 379(7–8), 920–930.
Haka,, A. S., Shafer‐Peltier,, K. E., Fitzmaurice,, M., Crowe,, J., Dasari,, R. R., & Feld,, M. S. (2002). Identifying microcalcifications in benign and malignant breast lesions by probing differences in their chemical composition using Raman spectroscopy. Cancer Research, 62(18), 5375–5380.
Halicek,, M., Fabelo,, H., Ortega,, S., Callico,, G. M., & Fei,, B. (2019). In‐vivo and ex‐vivo tissue analysis through hyperspectral imaging techniques: Revealing the invisible features of cancer. Cancers, 11(6), 756.
Hao,, J., Xiong,, B., Cheng,, X., He,, Y., & Yeung,, E. S. (2014). High‐throughput sulfide sensing with colorimetric analysis of single Au–Ag core–shell nanoparticles. Analytical Chemistry, 86(10), 4663–4667.
Haralick,, R. M., Shanmugam,, K., & Dinstein,, I. H. (1973). Textural features for image classification. IEEE Transactions on Systems, Man, and Cybernetics, SMC‐3(6), 610–621.
He,, C., Duan,, X., Guo,, N., Chan,, C., Poon,, C., Weichselbaum,, R. R., & Lin,, W. (2016). Core–shell nanoscale coordination polymers combine chemotherapy and photodynamic therapy to potentiate checkpoint blockade cancer immunotherapy. Nature Communications, 7, 12499.
Howes,, P. D., Rana,, S., & Stevens,, M. M. (2014). Plasmonic nanomaterials for biodiagnostics. Chemical Society Reviews, 43(11), 3835–3853.
Hu,, Y., Zhang,, L., Zhang,, Y., Wang,, B., Wang,, Y., Fan,, Q., … Wang,, L. (2015). Plasmonic nanobiosensor based on hairpin DNA for detection of trace oligonucleotides biomarker in cancers. ACS Applied Materials %26 Interfaces, 7(4), 2459–2466.
Huth,, F., Govyadinov,, A., Amarie,, S., Nuansing,, W., Keilmann,, F., & Hillenbrand,, R. (2012). Nano‐FTIR absorption spectroscopy of molecular fingerprints at 20 nm spatial resolution. Nano Letters, 12(8), 3973–3978.
Hwu,, S., Blickenstorfer,, Y., Tiefenauer,, R. F., Gonnelli,, C., Schmidheini,, L., Lüchtefeld,, I., … Vörös,, J. n. (2019). Dark‐field microwells toward high‐throughput direct miRNA sensing with gold nanoparticles. ACS Sensors, 4(7), 1950–1956.
Inci,, F., Tokel,, O., Wang,, S., Gurkan,, U. A., Tasoglu,, S., Kuritzkes,, D. R., & Demirci,, U. (2013). Nanoplasmonic quantitative detection of intact viruses from unprocessed whole blood. ACS Nano, 7(6), 4733–4745.
Jacques,, S. L. (2013). Optical properties of biological tissues: A review. Physics in Medicine %26 Biology, 58(11), R37–R61.
Jain,, P. K., Lee,, K. S., El‐Sayed,, I. H., & El‐Sayed,, M. A. (2006). Calculated absorption and scattering properties of gold nanoparticles of different size, shape, and composition: Applications in biological imaging and biomedicine. The Journal of Physical Chemistry B, 110(14), 7238–7248.
Jenkins,, S. V., Qu,, H., Mudalige,, T., Ingle,, T. M., Wang,, R., Wang,, F., … Zhang,, Y. (2015). Rapid determination of plasmonic nanoparticle agglomeration status in blood. Biomaterials, 51, 226–237.
Jing,, C., Gu,, Z., & Long,, Y.‐T. (2016). Imaging electrocatalytic processes on single gold nanorods. Faraday Discussions, 193, 371–385.
Jing,, C., Rawson,, F. J., Zhou,, H., Shi,, X., Li,, W.‐H., Li,, D.‐W., & Long,, Y.‐T. (2014). New insights into electrocatalysis based on plasmon resonance for the real‐time monitoring of catalytic events on single gold nanorods. Analytical Chemistry, 86(11), 5513–5518.
Johnson,, W. R., Wilson,, D. W., Fink,, W., Humayun,, M. S., & Bearman,, G. H. (2007). Snapshot hyperspectral imaging in ophthalmology. Journal of Biomedical Optics, 12(1), 014036.
Kallepitis,, C., Bergholt,, M. S., Mazo,, M. M., Leonardo,, V., Skaalure,, S. C., Maynard,, S. A., & Stevens,, M. M. (2017). Quantitative volumetric Raman imaging of three dimensional cell cultures. Nature Communications, 8(1), 1–9.
Kamruzzaman,, M., Makino,, Y., & Oshita,, S. (2016). Rapid and non‐destructive detection of chicken adulteration in minced beef using visible near‐infrared hyperspectral imaging and machine learning. Journal of Food Engineering, 170, 8–15.
Ki,, J., Lee,, H. Y., Son,, H. Y., Huh,, Y.‐M., & Haam,, S. (2019). Sensitive plasmonic detection of miR‐10b in biological samples using enzyme‐assisted target recycling and developed LSPR probe. ACS Applied Materials %26 Interfaces, 11(21), 18923–18929.
Kong,, S. G., Martin,, M. E., & Vo‐Dinh,, T. (2006). Hyperspectral fluorescence imaging for mouse skin tumor detection. ETRI Journal, 28(6), 770–776.
Kuching,, S. (2007). The performance of maximum likelihood, spectral angle mapper, neural network and decision tree classifiers in hyperspectral image analysis. Journal of Computer Science, 3(6), 419–423.
Larsen,, E. L., Randeberg,, L. L., Aksnes,, A., Svaasand,, L. O., Olstad,, E., & Haugen,, O. A. (2011). Hyperspectral imaging of atherosclerotic plaques in vitro. Journal of Biomedical Optics, 16(2), 026011.
Lasch,, P., Stämmler,, M., Zhang,, M., Baranska,, M., Bosch,, A., & Majzner,, K. (2018). FT‐IR hyperspectral imaging and artificial neural network analysis for identification of pathogenic bacteria. Analytical Chemistry, 90(15), 8896–8904.
Lee,, J.‐H., Kim,, B.‐C., Oh,, B.‐K., & Choi,, J.‐W. (2013). Highly sensitive localized surface plasmon resonance immunosensor for label‐free detection of HIV‐1. Nanomedicine: Nanotechnology, Biology and Medicine, 9(7), 1018–1026.
Lee,, J. U., Nguyen,, A. H., & Sim,, S. J. (2015). A nanoplasmonic biosensor for label‐free multiplex detection of cancer biomarkers. Biosensors and Bioelectronics, 74, 341–346.
Lee,, K., Cui,, Y., Lee,, L. P., & Irudayaraj,, J. (2014). Quantitative imaging of single mRNA splice variants in living cells. Nature Nanotechnology, 9(6), 474–480.
Lei,, G., Gao,, P. F., Yang,, T., Zhou,, J., Zhang,, H. Z., Sun,, S. S., … Huang,, C. Z. (2017). Photoinduced electron transfer process visualized on single silver nanoparticles. ACS Nano, 11(2), 2085–2093.
Li,, K., Qin,, W., Li,, F., Zhao,, X., Jiang,, B., Wang,, K., … Li,, D. (2013). Nanoplasmonic imaging of latent fingerprints and identification of cocaine. Angewandte Chemie International Edition, 52(44), 11542–11545.
Li,, Q., Wang,, Y., Liu,, H., & Chen,, Z. (2012). Nerve fibers identification based on molecular hyperspectral imaging technology. Paper presented at the 2012 IEEE International Conference on Computer Science and Automation Engineering (CSAE).
Li,, S., Du,, Y., He,, T., Shen,, Y., Bai,, C., Ning,, F., … Zhou,, X. (2017). Nanobubbles: An effective way to study gas‐generating catalysis on a single nanoparticle. Journal of the American Chemical Society, 139(40), 14277–14284.
Li,, T., Wu,, X., Liu,, F., & Li,, N. (2017). Analytical methods based on the light‐scattering of plasmonic nanoparticles at the single particle level with dark‐field microscopy imaging. Analyst, 142(2), 248–256.
Li,, Z., Fang,, Y., Wang,, Y., Jiang,, Y., Liu,, T., & Wang,, W. (2017). Visualizing the bidirectional electron transfer in a Schottky junction consisting of single CdS nanoparticles and a planar gold film. Chemical Science, 8(7), 5019–5023.
Link,, S., & El‐Sayed,, M. A. (1999). Size and temperature dependence of the plasmon absorption of colloidal gold nanoparticles. The Journal of Physical Chemistry B, 103(21), 4212–4217.
Liu,, L., & Ngadi,, M. (2013). Detecting fertility and early embryo development of chicken eggs using near‐infrared hyperspectral imaging. Food and Bioprocess Technology, 6(9), 2503–2513.
Liu,, Y., & Huang,, C. Z. (2013). Real‐time dark‐field scattering microscopic monitoring of the in situ growth of single Ag@ Hg nanoalloys. ACS Nano, 7(12), 11026–11034.
Loiseau,, A., Zhang,, L., Hu,, D., Salmain,, M., Mazouzi,, Y., Flack,, R., … Boujday,, S. (2019). Core–shell gold/silver nanoparticles for localized surface Plasmon resonance‐based naked‐eye toxin biosensing. ACS Applied Materials %26 Interfaces, 11(50), 46462–46471.
Lu,, G., & Fei,, B. (2014). Medical hyperspectral imaging: A review. Journal of Biomedical Optics, 19(1), 010901.
Ma,, X., Song,, S., Kim,, S., Kwon,, M.‐s., Lee,, H., Park,, W., & Sim,, S. J. (2019). Single gold‐bridged nanoprobes for identification of single point DNA mutations. Nature Communications, 10(1), 1–13.
Matthäus,, C., Boydston‐White,, S., Miljković,, M., Romeo,, M., & Diem,, M. (2006). Raman and infrared microspectral imaging of mitotic cells. Applied Spectroscopy, 60(1), 1–8.
McFarland,, A. D., & Van Duyne,, R. P. (2003). Single silver nanoparticles as real‐time optical sensors with zeptomole sensitivity. Nano Letters, 3(8), 1057–1062.
Mehta,, N., Shaik,, S., Devireddy,, R., & Gartia,, M. R. (2018). Single‐cell analysis using hyperspectral imaging modalities. Journal of Biomechanical Engineering, 140(2), 020802.
Mehta,, N., Shaik,, S., Sahu,, S., Devireddy,, R., & Gartia,, M. R. (2019). Non‐invasive spectral analysis of osteogenic and adipogenic differentiation in adipose derived stem cells using dark‐field hyperspectral imaging technique. Paper presented at the Label‐free Biomedical Imaging and Sensing (LBIS) 2019, Vol. 20890, SPIE.
Misra,, S. K., Ostadhossein,, F., Daza,, E., Johnson,, E. V., & Pan,, D. (2016). Hyperspectral imaging offers visual and quantitative evidence of drug release from zwitterionic‐phospholipid‐nanocarbon when concurrently tracked in 3D intracellular space. Advanced Functional Materials, 26(44), 8031–8041.
More,, S. S., Beach,, J. M., & Vince,, R. (2016). Early detection of amyloidopathy in Alzheimer`s mice by hyperspectral endoscopy. Investigative Ophthalmology %26 Visual Science, 57(7), 3231–3238.
More,, S. S., & Vince,, R. (2014). Hyperspectral imaging signatures detect amyloidopathy in Alzheimer`s mouse retina well before onset of cognitive decline. ACS Chemical Neuroscience, 6(2), 306–315.
Mortimer,, M., Gogos,, A., Bartolomé,, N., Kahru,, A., Bucheli,, T. D., & Slaveykova,, V. I. (2014). Potential of hyperspectral imaging microscopy for semi‐quantitative analysis of nanoparticle uptake by protozoa. Environmental Science %26 Technology, 48(15), 8760–8767.
Movasaghi,, Z., Rehman,, S., & Rehman,, I. U. (2007). Raman spectroscopy of biological tissues. Applied Spectroscopy Reviews, 42(5), 493–541.
Novo,, C., Funston,, A. M., & Mulvaney,, P. (2008). Direct observation of chemical reactions on single gold nanocrystals using surface plasmon spectroscopy. Nature Nanotechnology, 3(10), 598–602.
Nusz,, G. J., Marinakos,, S. M., Curry,, A. C., Dahlin,, A., Höök,, F., Wax,, A., & Chilkoti,, A. (2008). Label‐free plasmonic detection of biomolecular binding by a single gold nanorod. Analytical Chemistry, 80(4), 984–989.
Oh,, E. S., Heo,, C., Kim,, J. S., Suh,, M., Lee,, Y. H., & Kim,, J.‐M. (2013). Hyperspectral fluorescence imaging for cellular iron mapping in the in vitro model of Parkinson`s disease. Journal of Biomedical Optics, 19(5), 051207.
Owen,, D. M., Manning,, H. B., de Beule,, P., Talbot,, C., Requejo‐Isidro,, J., Dunsby,, C., … Munro,, I. (2007). Development of a hyperspectral fluorescence lifetime imaging microscope and its application to tissue imaging. Paper presented at the Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues V.
Ozbay,, E. (2006). Plasmonics: Merging photonics and electronics at nanoscale dimensions. Science, 311(5758), 189–193.
Palonpon,, A. F., Ando,, J., Yamakoshi,, H., Dodo,, K., Sodeoka,, M., Kawata,, S., & Fujita,, K. (2013). Raman and SERS microscopy for molecular imaging of live cells. Nature Protocols, 8(4), 677–692.
Panasyuk,, S. V., Yang,, S., Faller,, D. V., Ngo,, D., Lew,, R. A., Freeman,, J. E., & Rogers,, A. E. (2007). Medical hyperspectral imaging to facilitate residual tumor identification during surgery. Cancer Biology %26 Therapy, 6(3), 439–446.
Park,, B., Yoon,, S., Lee,, S., Sundaram,, J., Windham,, W., Hinton,, A., Jr., & Lawrence,, K. (2012). Acousto‐optic tunable filter hyperspectral microscope imaging method for characterizing spectra from foodborne pathogens. Transactions of the ASABE, 55(5), 1997–2006.
Paulite,, M., Fakhraai,, Z., Li,, I. T., Gunari,, N., Tanur,, A. E., & Walker,, G. C. (2011). Imaging secondary structure of individual amyloid fibrils of a β2‐microglobulin fragment using near‐field infrared spectroscopy. Journal of the American Chemical Society, 133(19), 7376–7383.
Pena,, M. D. P. S., Gottipati,, A., Tahiliani,, S., Neu‐Baker,, N. M., Frame,, M. D., Friedman,, A. J., & Brenner,, S. A. (2016). Hyperspectral imaging of nanoparticles in biological samples: Simultaneous visualization and elemental identification. Microscopy Research and Technique, 79(5), 349–358.
Pereira,, M. L. d. O., Grasseschi,, D., & Toma,, H. E. (2017). Photocatalytic activity of reduced graphene oxide–gold nanoparticle nanomaterials: Interaction with asphaltene and conversion of a model compound. Energy %26 Fuels, 32(3), 2673–2680.
Petryayeva,, E., & Krull,, U. J. (2011). Localized surface plasmon resonance: Nanostructures, bioassays and biosensing—A review. Analytica Chimica Acta, 706(1), 8–24.
Poon,, C.‐Y., Wei,, L., Xu,, Y., Chen,, B., Xiao,, L., & Li,, H.‐W. (2016). Quantification of cancer biomarkers in serum using scattering‐based quantitative single particle intensity measurement with a dark‐field microscope. Analytical Chemistry, 88(17), 8849–8856.
Pu,, H., Lin,, L., & Sun,, D. W. (2019). Principles of hyperspectral microscope imaging techniques and their applications in food quality and safety detection: A review. Comprehensive Reviews in Food Science and Food Safety, 18(4), 853–866.
Pully,, V., Lenferink,, A. T., & Otto,, C. (2011). Time‐lapse Raman imaging of single live lymphocytes. Journal of Raman Spectroscopy, 42(2), 167–173.
Raphael,, M. P., Christodoulides,, J. A., Delehanty,, J. B., Long,, J. P., & Byers,, J. M. (2013). Quantitative imaging of protein secretions from single cells in real time. Biophysical Journal, 105(3), 602–608.
Reinhard,, B. M., Sheikholeslami,, S., Mastroianni,, A., Alivisatos,, A. P., & Liphardt,, J. (2007). Use of plasmon coupling to reveal the dynamics of DNA bending and cleavage by single EcoRV restriction enzymes. Proceedings of the National Academy of Sciences of the United States of America, 104(8), 2667–2672.
Renkoski,, T. E., Utzinger,, U., & Hatch,, K. D. (2012). Wide‐field spectral imaging of human ovary autofluorescence and oncologic diagnosis via previously collected probe data. Journal of Biomedical Optics, 17(3), 036003.
Riggs,, R. D., Chen,, I.‐H., Pustovyy,, O., Zinner,, B., Sorokulova,, I., & Vodyanoy,, V. (2020). Hyperspectral imaging of a single bacterial cell.
Sanz,, J. A., Fernandes,, A. M., Barrenechea,, E., Silva,, S., Santos,, V., Gonçalves,, N., … Melo‐Pinto,, P. (2016). Lamb muscle discrimination using hyperspectral imaging: Comparison of various machine learning algorithms. Journal of Food Engineering, 174, 92–100.
Saylan,, Y., Erdem,, Ö., Ünal,, S., & Denizli,, A. (2019). An alternative medical diagnosis method: Biosensors for virus detection. Biosensors, 9(2), 65.
Schnarr,, K., Mooney,, R., Weng,, Y., Zhao,, D., Garcia,, E., Armstrong,, B., … Berlin,, J. M. (2013). Gold nanoparticle‐loaded neural stem cells for photothermal ablation of cancer. Advanced Healthcare Materials, 2(7), 976–982.
Schols,, R. M., Bouvy,, N. D., van Dam,, R. M., & Stassen,, L. P. (2013). Advanced intraoperative imaging methods for laparoscopic anatomy navigation: An overview. Surgical Endoscopy, 27(6), 1851–1859.
Schultz,, R. A., Nielsen,, T., Zavaleta,, J. R., Ruch,, R., Wyatt,, R., & Garner,, H. R. (2001). Hyperspectral imaging: A novel approach for microscopic analysis. Cytometry, 43(4), 239–247.
Schultz,, S., Smith,, D. R., Mock,, J. J., & Schultz,, D. A. (2000). Single‐target molecule detection with nonbleaching multicolor optical immunolabels. Proceedings of the National Academy of Sciences of the United States of America, 97(3), 996–1001.
Shannahan,, J. H., Sowrirajan,, H., Persaud,, I., Podila,, R., & Brown,, J. M. (2015). Impact of silver and iron nanoparticle exposure on cholesterol uptake by macrophages. Journal of Nanomaterials, 2015, 1–12.
Shi,, L., Jing,, C., Gu,, Z., & Long,, Y.‐T. (2015). Brightening gold nanoparticles: New sensing approach based on plasmon resonance energy transfer. Scientific Reports, 5, 10142.
Shi,, L., Jing,, C., Ma,, W., Li,, D. W., Halls,, J. E., Marken,, F., & Long,, Y. T. (2013). Plasmon resonance scattering spectroscopy at the single‐nanoparticle level: Real‐time monitoring of a click reaction. Angewandte Chemie International Edition, 52(23), 6011–6014.
Siddiqi,, A. M., Li,, H., Faruque,, F., Williams,, W., Lai,, K., Hughson,, M., … Johnson,, W. (2008). Use of hyperspectral imaging to distinguish normal, precancerous, and cancerous cells. Cancer Cytopathology: Interdisciplinary International Journal of the American Cancer Society, 114(1), 13–21.
Siripatrawan,, U., Makino,, Y., Kawagoe,, Y., & Oshita,, S. (2011). Rapid detection of Escherichia coli contamination in packaged fresh spinach using hyperspectral imaging. Talanta, 85(1), 276–281.
Smith,, J. G., Chakraborty,, I., & Jain,, P. K. (2016). In situ single‐nanoparticle spectroscopy study of bimetallic nanostructure formation. Angewandte Chemie International Edition, 55(34), 9979–9983.
Smith,, J. G., & Jain,, P. K. (2016). The ligand shell as an energy barrier in surface reactions on transition metal nanoparticles. Journal of the American Chemical Society, 138(21), 6765–6773.
Smith,, J. G., Yang,, Q., & Jain,, P. K. (2014). Identification of a critical intermediate in galvanic exchange reactions by single‐nanoparticle‐resolved kinetics. Angewandte Chemie, 126(11), 2911–2916.
Sönnichsen,, C., Reinhard,, B. M., Liphardt,, J., & Alivisatos,, A. P. (2005). A molecular ruler based on plasmon coupling of single gold and silver nanoparticles. Nature Biotechnology, 23(6), 741–745.
Sorg,, B. S., Moeller,, B. J., Donovan,, O., Cao,, Y., & Dewhirst,, M. W. (2005). Hyperspectral imaging of hemoglobin saturation in tumor microvasculature and tumor hypoxia development. Journal of Biomedical Optics, 10(4), 044004.
Su,, W. H., & Sun,, D. W. (2018). Fourier transform infrared and Raman and hyperspectral imaging techniques for quality determinations of powdery foods: A review. Comprehensive Reviews in Food Science and Food Safety, 17(1), 104–122.
Tao,, F., & Peng,, Y. (2014). A method for nondestructive prediction of pork meat quality and safety attributes by hyperspectral imaging technique. Journal of Food Engineering, 126, 98–106.
Taylor,, A., Wilson,, K. M., Murray,, P., Fernig,, D. G., & Lévy,, R. (2012). Long‐term tracking of cells using inorganic nanoparticles as contrast agents: Are we there yet? Chemical Society Reviews, 41(7), 2707–2717.
Tian,, Y., Zhang,, L., & Wang,, L. (2020). DNA‐functionalized plasmonic nanomaterials for optical biosensing. Biotechnology Journal, 15(1), 1800741.
Usenik,, P., Bürmen,, M., Fidler,, A., Pernuš,, F., & Likar,, B. (2012). Evaluation of cross‐polarized near infrared hyperspectral imaging for early detection of dental caries. Paper presented at the Lasers in Dentistry XVIII.
Verebes,, G. S., Melchiorre,, M., Garcia‐Leis,, A., Ferreri,, C., Marzetti,, C., & Torreggiani,, A. (2013). Hyperspectral enhanced dark field microscopy for imaging blood cells. Journal of Biophotonics, 6(11–12), 960–967.
Vermaas,, W. F., Timlin,, J. A., Jones,, H. D., Sinclair,, M. B., Nieman,, L. T., Hamad,, S. W., … Haaland,, D. M. (2008). In vivo hyperspectral confocal fluorescence imaging to determine pigment localization and distribution in cyanobacterial cells. Proceedings of the National Academy of Sciences of the United States of America, 105(10), 4050–4055.
Vetten,, M. A., Tlotleng,, N., Rascher,, D. T., Skepu,, A., Keter,, F. K., Boodhia,, K., … Gulumian,, M. (2013). Label‐free in vitro toxicity and uptake assessment of citrate stabilised gold nanoparticles in three cell lines. Particle and Fibre Toxicology, 10(1), 50.
Vo‐Dinh,, T. (2004). A hyperspectral imaging system for in vivo optical diagnostics. IEEE Engineering in Medicine and Biology Magazine, 23(5), 40–49.
Wang,, K., Shangguan,, L., Liu,, Y., Jiang,, L., Zhang,, F., Wei,, Y., … Liu,, S. (2017). In situ detection and imaging of telomerase activity in cancer cell lines via disassembly of plasmonic core–satellites nanostructured probe. Analytical Chemistry, 89(13), 7262–7268.
Wang,, W. (2018). Imaging the chemical activity of single nanoparticles with optical microscopy. Chemical Society Reviews, 47(7), 2485–2508.
Wang,, X., Cui,, Y., & Irudayaraj,, J. (2015). Single‐cell quantification of cytosine modifications by hyperspectral dark‐field imaging. ACS Nano, 9(12), 11924–11932.
Wang,, X., Li,, Y., Wang,, H., Fu,, Q., Peng,, J., Wang,, Y., … Zhan,, L. (2010). Gold nanorod‐based localized surface plasmon resonance biosensor for sensitive detection of hepatitis B virus in buffer, blood serum and plasma. Biosensors and Bioelectronics, 26(2), 404–410.
Wang,, Y. W., Reder,, N. P., Kang,, S., Glaser,, A. K., & Liu,, J. T. (2017). Multiplexed optical imaging of tumor‐directed nanoparticles: A review of imaging systems and approaches. Nano, 1(4), 369.
Weinkauf,, H., & Brehm‐Stecher,, B. F. (2009). Enhanced dark field microscopy for rapid artifact‐free detection of nanoparticle binding to Candida albicans cells and hyphae. Biotechnology Journal: Healthcare Nutrition Technology, 4(6), 871–879.
Weitzel,, L., Krabbe,, A., Kroker,, H., Thatte,, N., Tacconi‐Garman,, L., Cameron,, M., & Genzel,, R. (1996). 3D: The next generation near‐infrared imaging spectrometer. Astronomy and Astrophysics Supplement Series, 119(3), 531–546.
Willets,, K. A., & Van Duyne,, R. P. (2007). Localized surface plasmon resonance spectroscopy and sensing. Annual Review of Physical Chemistry, 58, 267–297.
Wrobel,, T. P., Koziol,, P., Raczkowska,, M. K., Liberda,, D., Paluszkiewicz,, C., & Kwiatek,, W. M. (2019). Noise‐free simulation of an FT‐IR imaging hyperspectral dataset of pancreatic biopsy core bound by experiment. Scientific Data, 6(1), 1–8.
Xiong,, B., Zhou,, R., Hao,, J., Jia,, Y., He,, Y., & Yeung,, E. S. (2013). Highly sensitive sulphide mapping in live cells by kinetic spectral analysis of single Au–Ag core–shell nanoparticles. Nature Communications, 4, 1708.
Xu,, D., Liu,, D., Xie,, T., Cao,, Y., Wang,, J.‐G., Ning,, Z.‐J., … Tian,, H. (2016). Plasmon resonance scattering at perovskite CH3NH3PbI3 coated single gold nanoparticles: Evidence for electron transfer. Chemical Communications, 52(64), 9933–9936.
Yanik,, A. A., Huang,, M., Kamohara,, O., Artar,, A., Geisbert,, T. W., Connor,, J. H., & Altug,, H. (2010). An optofluidic nanoplasmonic biosensor for direct detection of live viruses from biological media. Nano Letters, 10(12), 4962–4969.
Yguerabide,, J., & Yguerabide,, E. E. (1998). Light‐scattering submicroscopic particles as highly fluorescent analogs and their use as tracer labels in clinical and biological applications: II. Experimental characterization. Analytical Biochemistry, 262(2), 157–176.
Yonzon,, C. R., Jeoung,, E., Zou,, S., Schatz,, G. C., Mrksich,, M., & Van Duyne,, R. P. (2004). A comparative analysis of localized and propagating surface plasmon resonance sensors: The binding of concanavalin A to a monosaccharide functionalized self‐assembled monolayer. Journal of the American Chemical Society, 126(39), 12669–12676.
Yoon,, S.‐C., Windham,, W. R., Ladely,, S. R., Heitschmidt,, J. W., Lawrence,, K. C., Park,, B., … Cray,, W. C. (2013). Hyperspectral imaging for differentiating colonies of non‐0157 Shiga‐toxin producing Escherichia coli (STEC) serogroups on spread plates of pure cultures. Journal of Near Infrared Spectroscopy, 21(2), 81–95.
Zhang,, S., Geryak,, R., Geldmeier,, J., Kim,, S., & Tsukruk,, V. V. (2017). Synthesis, assembly, and applications of hybrid nanostructures for biosensing. Chemical Reviews, 117(20), 12942–13038.
Zhang,, Y., Shuai,, Z., Zhou,, H., Luo,, Z., Liu,, B., Zhang,, Y., … Weng,, L. (2018). Single‐molecule analysis of microRNA and logic operations using a smart plasmonic nanobiosensor. Journal of the American Chemical Society, 140(11), 3988–3993.
Zheng,, S., Kim,, D.‐K., Park,, T. J., Lee,, S. J., & Lee,, S. Y. (2010). Label‐free optical diagnosis of hepatitis B virus with genetically engineered fusion proteins. Talanta, 82(2), 803–809.
Zhou,, J., Xu,, X., Liu,, X., Li,, H., Nie,, Z., Qing,, M., … Yao,, S. (2014). A gold nanoparticles colorimetric assay for label‐free detection of protein kinase activity based on phosphorylation protection against exopeptidase cleavage. Biosensors and Bioelectronics, 53, 295–300.
Zhou,, J., Yang,, T., He,, W., Pan,, Z., & Huang,, C. Z. (2018). Galvanic exchange process visualized on single silver nanoparticles via dark‐field microscopic imaging. Nanoscale, 10(26), 12805–12812.
Zhu,, H., Chu,, B., Zhang,, C., Liu,, F., Jiang,, L., & He,, Y. (2017). Hyperspectral imaging for presymptomatic detection of tobacco disease with successive projections algorithm and machine‐learning classifiers. Scientific Reports, 7(1), 1–12.
Zonios,, G., Bykowski,, J., & Kollias,, N. (2001). Skin melanin, hemoglobin, and light scattering properties can be quantitatively assessed in vivo using diffuse reflectance spectroscopy. Journal of Investigative Dermatology, 117(6), 1452–1457.
Zopf,, D., Pittner,, A., Dathe,, A., Grosse,, N., Csáki,, A., Arstila,, K., … Uhlrich,, G. n. (2019). Plasmonic nanosensor array for multiplexed DNA‐based pathogen detection. ACS Sensors, 4(2), 335–343.
Zuzak,, K. J., Naik,, S. C., Alexandrakis,, G., Hawkins,, D., Behbehani,, K., & Livingston,, E. H. (2007). Characterization of a near‐infrared laparoscopic hyperspectral imaging system for minimally invasive surgery. Analytical Chemistry, 79(12), 4709–4715.